Department of Health and Human Services

Part 1. Overview Information

Participating Organization(s)

National Institutes of Health (NIH)

Components of Participating Organizations

National Institute of Allergy and Infectious Diseases (NIAID)

National Eye Institute (NEI)

National Heart, Lung, and Blood Institute (NHLBI)

National Human Genome Research Institute (NHGRI)

National Institute on Aging (NIA)

National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIAMS)

National Institute of Dental and Craniofacial Research (NIDCR)

All applications to this funding opportunity announcement should fall within the mission of the Institutes/Centers. The following NIH Offices may co-fund applications assigned to those Institutes/Centers.

Office of Research on Women's Health (ORWH)

Office of Data Science Strategy (ODSS)

Note: Not all NIH Institutes, Centers, and Offices (ICOs) participate in Announcements. Applicants should carefully note which ICOs participate in this announcement and view their respective areas of research interest at the ICO-Specific Scientific Interests website. ICOs that do not participate in this announcement will not consider applications for funding.

Funding Opportunity Title
Systems Biology of Infection and Inflammation in Chronic Diseases (U19 Clinical Trial Not Allowed)
Activity Code

U19 Research Program – Cooperative Agreements

Announcement Type
New
Related Notices
  • Check for any recent Notices of NIH Policy Changes that may impact application requirements.
  • January 23, 2026 - NIH Pause on New Submissions to the NIH Human Embryonic Stem Cell Registry and Request for Information on Reducing Reliance on Human Embryonic Stem Cells in NIH-Supported Research. See Notice, NOT-OD-26-031.
Funding Opportunity Number (FON)
RFA-AI-28-014
Companion Notice of Funding Opportunity
None
Number of Applications

See Section III. 3. Additional Information on Eligibility.

Assistance Listing Number(s)
93.8RP, 93.8TD, 93.8AM, 93.543, 93.AGR, 93.172, 93.121, 93.HL2, 93.AR1, 93.ADR, 93.DSS
Notice of Funding Opportunity Purpose

The purpose of this notice of funding opportunity (NOFO) is to support the advancement of systems-level understanding of the link between infectious pathogens and inflammatory pathways that result in predisposition, onset and progression of chronic diseases. The NOFO will stimulate integration of clinical and patient data, large-scale omics datasets, advanced Artificial Intelligence (AI) and computational modeling to prevent, treat, and mitigate the combined impact of chronic diseases, inflammation, and infections.

Funding Opportunity Goal(s)

NIH's mission is to seek fundamental knowledge about the nature and behavior of living systems and the application of that knowledge to enhance health, lengthen life, and reduce illness and disability. 
 

Key Dates

Posted Date
November 04, 2026
Open Date (Earliest Submission Date)
January 18, 2027
Application Due Dates Review and Award Cycles
New Renewal / Resubmission / Revision (as allowed) AIDS - New/Renewal/Resubmission/Revision, as allowed Scientific Merit Review Advisory Council Review Earliest Start Date
February 18, 2027 Not Applicable Not Applicable July 2027 October 2027 January 2028

All applications are due by 5:00 PM local time of applicant organization. 

Applicants are encouraged to apply early to allow adequate time to make any corrections to errors found in the application during the submission process by the due date.

Expiration Date
February 19, 2027
Due Dates for E.O. 12372

Not Applicable

Required Application Instructions

It is critical that applicants follow the Multi-Project (M) Instructions in the How to Apply - Application Guide, except where instructed to do otherwise (in this NOFO or in a Notice from the NIH Guide for Grants and Contracts). Conformance to all requirements (both in the How to Apply - Application Guide and the NOFO) is required and strictly enforced. Applicants must read and follow all application instructions in the How to Apply - Application Guide as well as any program-specific instructions noted in Section IV. When the program-specific instructions deviate from those in the How to Apply - Application Guide, follow the program-specific instructions. Applications that do not comply with these instructions may be delayed or not accepted for review.

There are several options available to submit your application through Grants.gov to NIH and Department of Health and Human Services partners. You must use one of these submission options to access the application forms for this opportunity.

  1. Use the NIH ASSIST system to prepare, submit and track your application online.
  2. Use an institutional system-to-system (S2S) solution to prepare and submit your application to Grants.gov and eRA Commons to track your application. Check with your institutional officials regarding availability.

Part 2. Full Text of Announcement

Section I. Notice of Funding Opportunity Description

Research Objectives

Critical gaps remain in understanding the links among acute and chronic infections, microbiome alterations, inflammation, and chronic diseases. To address these gaps, this notice of funding opportunity (NOFO) will support system biology studies that leverage existing longitudinal patients cohorts, metadata (e.g., primary care, health systems, and electronic health records [EHRs]) and multiomics datasets; integrate high-throughput molecular and clinical data; apply advanced Artificial Intelligence (AI) and computational modeling; and focus on validating and translating findings through laboratory studies, including new approach methodologies (NAMs) and animal models, as well as analysis of real-world data (RWD). The long-term scientific goals of this NOFO will be achieved by establishing Centers that will be focused either on the links between chronic and infectious diseases (Chronic and Infectious Diseases Systems Biology Centers) or on the role(s) of inflammation in chronic diseases (Systems Biology Inflammation Centers). 

The research activities supported by this NOFO will enable: 

  • Multiscale, multiomic insights across multiple diseases that can result in new disease classifications. 
  • Discovery of novel drug target and biomarkers across chronic diseases.
  • Development of diagnostic biomarkers for disease risk, progression and severity.
  • Rational design of combination therapies and biomarkers of efficacy and toxicity.
  • Harmonized cross disease datasets and data framework that embrace Findable, Accessible, Interoperable, and Reproducible (FAIR) principles.

Chronic and Infectious Diseases Systems Biology Center (CIDSB)

Centers that study the link between chronic and infectious diseases will support innovative research on a broad spectrum of chronic diseases that may either result from an infection, or contribute to, enhance susceptibility, or exacerbate infections. These could include but are not limited to disorders of immune modulation and inflammation (e.g. inflammatory bowel disease (IBD), cancer, neurological diseases, cardiovascular disease, metabolic disorders (e.g. diabetes, obesity), and mental health disorders). The CIDSB Centers are envisioned to encompass a range of infections of high relevance in the United States, including but not limited to Lyme, influenza, respiratory syncytial virus, tuberculosis, Epstein Barr Virus, among other, recurring or persistent infections such as but not limited to pneumonia or urinary tract infections. The CIDSB Centers could support data collection from prospective infection cohorts to a limited degree to ensure sufficient data is available for model development and validation.

Specific Areas of Research Interest include but are not limited to those listed below:

  • Use of existing cohorts, EHRs, and RWD, including people with chronic diseases and those with infectious diseases who develop post-acute symptoms.
  • Determination of host/pathogen, microbiome, genetic and epigenetic biosignatures in response to infection and/or chronic disease, identify signatures associated with preventing negative outcomes, or with successful therapeutic intervention.
  • Determination of whether and how timing of exposure across the lifespan to infections and antibiotics influence chronic diseases risk and outcomes in different populations.

Systems Biology Inflammation Center (SBI)

Centers that study the link between inflammation and chronic diseases will support innovative research on the role of inflammation in chronic diseases, specifically those already studied in the Accelerating Medicines Partnership® (AMP®) and related NIH programs. The Centers will continue to build on a common goal of deconstructing the complex biology of chronic diseases with multidimensional data to accelerate the discovery of novel targets and biomarkers. The SBI Centers will enable a systems biology approach to identify shared and distinct, causal, immune/inflammatory mechanisms across chronic diseases to accelerate the discovery of novel, precision medicine, targets and biomarkers. 

Specific Areas of Research Interest include but are not limited to those listed below:

  • Increase the interoperability among relevant AMP data and fill-in critical data gaps by bringing external datasets and new data generation.
  • Build predictive models of inflammation/immune dysregulation common and specific to diseases and disease stages.
  • Identify inflammatory/immune signatures of disease across target and peripheral tissues.

Center Organization

The overall structure of the Center is designed to support multidisciplinary, multi-institutional research teams in the conduct of their Research Projects, integrating dedicated Cores for biospecimen collection, multiomics analyses, and advanced AI and computational modeling. 

Administrative Core: Responsible for managing, coordinating, and supervising the Center research and outreach activities, monitoring progress, participation in systems-biology Consortium-wide working groups, and ensuring that the overall project management plan is implemented effectively and within proposed timelines. One SBI recipient, selected by NIH, will be responsible for managing an Opportunities Funds for Collaborative Projects for the entire SBI program.  

Data and Modeling Core: Responsible for development, maintenance, storage, management and dissemination of datasets, analytical tools, computational models, reagents, and other resources generated by the Center in a secure manner.

Technology Development Core: If proposed, responsible for supporting and developing high-throughput technologies for systems biology analyses of clinical samples, including omics platforms such as genomics, transcriptomics, proteomics, metabolomics, lipidomics, methylomics, and microbiome profiling, as well as other advanced high throughput approaches. 

Validation and Translation Core: If proposed, responsible for supporting essential platforms to assess model precision and reproducibility to validate the findings from the Research Projects and Cores, including predictive models, biomarkers, and predicted candidate interventions. This Core serves as a critical bridge between systems-level discoveries and clinical applications thereby improving patient stratification, and advancing the development of diagnostics, therapeutics, and prevention approaches. 

Biospecimen Collection and Processing Core: Responsible for establishing the study cohort including potential recruitment and obtaining participant consent and/or interacting with the AMP program. Responsible for collection and processing of samples relevant to the proposed chronic illness, inflammation and/or acute infections according to the proposed Center. 

Research Projects: Centers will be organized around two to three Research Projects aligned with the overall Center goals of research on inflammation, pathogens, microbiome, and/or chronic diseases. Research Projects exploring hypothesis-driven research will be able to identify, quantify, model, and predict the interaction networks among inflammation and/or targeted pathogens, the microbiome, and host cells to understand chronic disease. 

Collaborative Interdisciplinary Teams and Outreach
Centers may span one or multiple institutions. CIDSB and SBI Centers will collaborate with each other as the CIDSB and SBI Consortia, respectively. The goals of CIDSB and SBI Consortia will be to improve the use of shared protocols, technologies, and data, enhance reproducibility, and coordinate outreach efforts promoting systems biology approaches to infectious, inflammatory, microbiome-related, and chronic diseases.

Scientific Advisory Group: A Consortium-wide Scientific Advisory Group (SAG) will be established by NIH in collaboration with the recipients. The SAG will assist in reviewing research productivity, progress toward the proposed goals, adherence to timelines, and the continued relevance of the research approach. Do not list names of possible SAG members in the application or contact potential members prior to award.

Applications Not Responsive to this NOFO

The following types of applications are not responsive to this NOFO and will not be reviewed:

  • Applications that do not use material from longitudinal human clinical samples (e.g. human cells or tissues, human blood, immune components, bacterial isolates) with clinical data.
  • Applications that focus exclusively on the molecular interaction networks of the pathogen with no consideration of those in the host.
  • Applications that focus solely on development of computational and software tools for "big-data" integration. 
  • Studies on HIV/AIDS.

Applicants are encouraged to contact the Scientific/Research Contacts to discuss their application prior to submission of their application.

See Section VIII. Other Information for award authorities and regulations.

Section II. Award Information

Funding Instrument

Cooperative Agreement: A financial assistance mechanism used when there will be substantial Federal scientific or programmatic involvement. Substantial involvement means that, after award, NIH scientific or program staff will assist, guide, coordinate, or participate in project activities. See Section VI.2 for additional information about the substantial involvement for this NOFO.

Application Types Allowed
New

The OER Glossary and the How to Apply - Application Guide provides details on these application types. Only those application types listed here are allowed for this NOFO.

Clinical Trial?

Not Allowed: Only accepting applications that do not propose clinical trials.

Funds Available and Anticipated Number of Awards

The following NIH components intend to commit the following amounts in FY 2028:

NIAID intends to commit a total of $18.5 million to fund 5 - 6 awards for Chronic and Infectious Diseases System Biology Centers.

NIA and NIAMS intend to commit a total of $6 million to fund 1 - 2 System Biology Inflammation Center awards.

NIDCR intends to commit a total of up to $1M for projects within NIDCR mission.

NEI intends to commit a total of $500,000 per year to fund eye-imaging integrated data.

Award Budget

Application budgets for CIDSB Center applications are not expected to exceed $2.5 million in direct costs per year. Applications budgets for SBI Center applications are not capped but must align with the actual needs of the project. For all Center applications, the budget must reflect the actual needs of the proposed project.

Award Project Period

The project period must be 5 years. 

NIH grants policies as described in the NIH Grants Policy Statement will apply to the applications submitted and awards made from this NOFO.

Section III. Eligibility Information

1. Eligible Applicants

Eligible Organizations

Higher Education Institutions - Includes all types

  • Public/State Controlled Institutions of Higher Education
  • Private Institutions of Higher Education

Nonprofits Other Than Institutions of Higher Education

  • Nonprofits with 501(c)(3) IRS Status (Other than Institutions of Higher Education)
  • Nonprofits without 501(c)(3) IRS Status (Other than Institutions of Higher Education)

For-Profit Organizations

  • Small Businesses
  • For-Profit Organizations (Other than Small Businesses)

Local Governments

  • State Governments
  • County Governments
  • City or Township Governments
  • Special District Governments
  • Indian/Native American Tribal Governments (Federally Recognized)
  • Indian/Native American Tribal Governments (Other than Federally Recognized)

Federal Governments

  • Eligible Agencies of the Federal Government
  • U.S. Territory or Possession

Other

  • Independent School Districts
  • Public Housing Authorities/Indian Housing Authorities
  • Native American Tribal Organizations (other than Federally recognized tribal governments)
  • Faith-based or Community-based Organizations
  • Regional Organizations

Foreign Organizations/International Collaborations

Non-domestic (non-U.S.) Entities (Foreign Organization) are not eligible to apply.

Non-domestic (non-U.S.) components of U.S. Organizations are not eligible to apply.

Foreign components, as defined in the NIH Grants Policy Statement, are allowed. 

NIH will no longer issue awards (i.e., new, renewal, or non-competing continuation) to domestic or foreign entities that involve foreign subawards/subcontracts. All NIH-funded research involving foreign subawards/subcontracts must be submitted in response to a NOFO that is specifically designated for funded international collaborations. See NIH Grants Policy Statement 16.8 Collaborative International Research Awards.

Applications involving foreign subawards/subcontracts submitted in response to this NOFO will be deemed noncompliant and will not be considered for funding. This policy applies to all monetary international collaborations resulting in foreign subawards/subcontracts, however, it does not preclude unfunded international collaborations or foreign components, funding for foreign consultants, or procurement of unique equipment or supplies from foreign vendors.

Required Registrations

Applicant organizations

Applicant organizations must complete and maintain the following registrations as described in the How to Apply- Application Guide to be eligible to apply for or receive an award. All registrations must be completed prior to the application being submitted. Registration can take 6 weeks or more, so applicants should begin the registration process as soon as possible. Failure to complete registrations in advance of a due date is not a valid reason for a late submission, please reference NIH Grants Policy Statement Section 2.3.9.2 Electronically Submitted Applications for additional information.

  • System for Award Management (SAM) – Applicants must complete and maintain an active registration, which requires renewal at least annually. The renewal process may require as much time as the initial registration. SAM registration includes the assignment of a Commercial and Government Entity (CAGE) Code for domestic organizations which have not already been assigned a CAGE Code. Foreign organizations must obtain a NATO Commercial and Government Entity (NCAGE) Code (in lieu of a CAGE code) in order to register in SAM.
    • Unique Entity Identifier (UEI)- A UEI is issued as part of the SAM.gov registration process. The same UEI must be used for all registrations, as well as on the grant application.
  • eRA Commons - Once the unique organization identifier is established, organizations can register with eRA Commons in tandem with completing their Grants.gov registration; all registrations must be in place by time of submission. eRA Commons requires organizations to identify at least one Signing Official (SO) and at least one Program Director/Principal Investigator (PD/PI) account in order to submit an application.
  • Grants.gov – Applicants must have an active SAM registration in order to complete the Grants.gov registration.

Program Directors/Principal Investigators (PD(s)/PI(s))

All PD(s)/PI(s) must have an eRA Commons account.  PD(s)/PI(s) should work with their organizational officials to either create a new account or to affiliate their existing account with the applicant organization in eRA Commons. If the PD/PI is also the organizational Signing Official, they must have two distinct eRA Commons accounts, one for each role. Obtaining an eRA Commons account can take up to 2 weeks.

All PD(s)/PI(s) must be registered with ORCID. The personal profile associated with the PD(s)/PI(s) eRA Commons account must be linked to a valid ORCID ID. For more information on linking an ORCID ID to an eRA Commons personal profile see the ORCID topic in our eRA Commons online help. 

Eligible Individuals (Program Director/Principal Investigator)

Any individual(s) with the skills, knowledge, and resources necessary to carry out the proposed research as the Program Director(s)/Principal Investigator(s) (PD(s)/PI(s)) is invited to work with his/her organization to develop an application for support. 

For institutions/organizations proposing multiple PDs/PIs, visit the Multiple Program Director/Principal Investigator Policy and submission details in the Senior/Key Person Profile (Expanded) Component of the How to Apply - Application Guide.

2. Cost Sharing

This NOFO does not require cost sharing as defined in the NIH Grants Policy Statement Section 1.2- Definitions of Terms.

3. Additional Information on Eligibility

Number of Applications

Applicant organizations may submit more than one application, provided that each application is scientifically distinct.

The NIH will not accept duplicate or highly overlapping applications under review at the same time per NIH Grants Policy Statement Section 2.3.7.4 Submission of Resubmission Application. This means that the NIH will not accept:

  • A new (A0) application that is submitted before issuance of the summary statement from the review of an overlapping new (A0) or resubmission (A1) application.
  • A resubmission (A1) application that is submitted before issuance of the summary statement from the review of the previous new (A0) application.
  • An application that has substantial overlap with another application pending appeal of initial peer review (see NIH Grants Policy Statement 2.3.9.4 Similar, Essentially Identical, or Identical Applications).

Section IV. Application and Submission Information

1. Requesting an Application Package

The application forms package specific to this opportunity must be accessed through ASSIST or an institutional system-to-system solution. A button to apply using ASSIST is available in Part 1 of this NOFO. See the administrative office for instructions if planning to use an institutional system-to-system solution.

2. Content and Form of Application Submission

It is critical that applicants follow the Multi-Project (M) Instructions in the How to Apply - Application Guide, except where instructed in this notice of funding opportunity to do otherwise (in this NOFO, in a policy notice, or other notice from NIH Guide for Grants and Contracts) and where instructions in the How to Apply - Application Guide are directly related to the Grants.gov downloadable forms currently used with most NIH opportunities. Conformance to the requirements in the How to Apply - Application Guide is required and strictly enforced. Applications that are out of compliance with these instructions may be delayed or not accepted for review.

Page Limitations

All page limitations described in the How to Apply- Application Guide and the Table of Page Limits must be followed.

Component Component Type for Submission Page Limit Required/Optional Minimum Maximum
Overall Overall 12 Required 1 1
Administrative Core Admin Core 6 Required 1 1
Data and Modeling Core DM Core 12 Required 1 1
Technology Development Core TD Core 6 Optional 0 1
Validation and Translation Core VT Core 12 Optional 0 1
Biospecimen Collection and Processing Core BCP Core 6 Required 1 1
Research Projects Project 12 Required 2 3

Instructions for the Submission of Multi-Component Applications

The following section supplements the instructions found in How to Apply- Application Guide and should be used for preparing a multi-component application.

The application should consist of the following components:

  • Overall: required, 1
  • Administrative Core: required, 1
  • Data and Modeling Core: required, 1
  • Technology Development Core: required for CIDSB, 1; optional for SBI
  • Validation and Translation Core: required for CIDSB, 1; optional for SBI
  • Biospecimen Collection and Processing Core: required, 1
  • Research Projects: required 3 for CIDSB; minimum 2 for SBI

Overall Component

When preparing the application, use Component Type 'Overall'.

All instructions in the How to Apply - Application Guide must be followed, with the following additional instructions, as noted.

SF424(R&R) Cover (Overall)

Complete entire form.

PHS 398 Cover Page Supplement (Overall)

Note: Human Embryonic Stem Cell lines from other components should be repeated in cell line table in Overall component.

Research & Related Other Project Information (Overall)

Follow standard instructions.

Project/Performance Site Locations (Overall)

Enter primary site only.

A summary of Project/Performance Sites in the Overall section of the assembled application image in eRA Commons compiled from data collected in the other components will be generated upon submission.

Research and Related Senior/Key Person Profile (Overall)

Include only the Project Director/Principal Investigator (PD/PI) and any multi-PDs/PIs (if applicable to this NOFO) for the entire application.

A summary of Senior/Key Persons followed by their Biographical Sketches in the Overall section of the assembled application image in eRA Commons will be generated upon submission.

Budget (Overall)

The only budget information included in the Overall component is the Estimated Project Funding section of the SF424 (R&R) Cover.

A budget summary in the Overall section of the assembled application image in eRA Commons compiled from detailed budget data collected in the other components will be generated upon submission.

PHS 398 Research Plan (Overall)

Specific Aims: List in priority order, the broad, long-range objectives and goals of the proposed Systems Biology Center. Describe the hypothesis or hypotheses to be tested.

Research Strategy: Applications submitted in response to this NOFO must be primarily aligned with the goals and objectives of only one type of Center, therefore applications should clearly state the type of Center (CIDSB or SBI) being established. Provide an overview of the Center's organizational structure, scientific focus, and overarching objectives. Describe how the proposed Research Projects and Cores will work together to apply systems biology approaches to understand the linkages among infectious diseases, the microbiome, inflammation, and chronic diseases, depending on which type of Center is proposed.  

  • Describe how the individual Research Projects and Cores relate to the overall goals of the Center and provide a cohesive and synergistic whole.
  • Describe how the multi-disciplinary Centers leverage unique research resources and patient populations to advance understanding of the type of Center selected. 
  • Describe how the individual Research Projects and Cores leverage systems approaches that will improve the ability to develop and use predictive computational models (e.g.: disease onset, progression and exacerbation; disease severity; and/or identify candidate targets for interventions).
  • Describe how the individual Research Projects and Cores will enable predictive model implementation and subsequent use of modeling approaches more broadly, including validation, translation and/or implementation in the clinic. 
  • Clearly define the approach for dissemination, validation, and implementation of Center outputs, such as models that stratify patients by risk, or forecast disease symptoms or patient outcomes that adhere to FAIR principles and toward a vision of federated learning.
  • Define a timeline and benchmarks plan that clearly articulates Center activities on a yearly basis.
  • Describe how the Center plans to complete any enrollment and the bulk of specimen collection within the first two to three years, make progress towards early data integration within the first three years, and conduct a majority of analysis, modeling, validation, and dissemination during the remaining two years. 
  • Describe plans for ongoing analysis, modeling, validation, and dissemination and intermediate benchmarks for those activities.

For CIDSB, describe:

  • Whether the Center will focus on a single or a variety of different infectious and chronic diseases to address the Program objectives. It is not necessary for Centers to only study a single infectious and/or chronic disease.
  • How the Center will include research objectives to explore both aspects of the interactions between infectious and chronic diseases that lead to worse outcomes. For example, research projects could focus on the mechanisms of increased susceptibility to a particular infection due to an underlying chronic illness; others could focus on how a different infectious disease results in chronic or post-acute sequalae; or research on worsening outcomes and susceptibilities that result from combinations of infectious and chronic illnesses over time.

For SBI, describe:

  • How the Center will include data and specimens from the AMP program, including Alzheimer's Disease (AMP AD 1.0 and AMP AD 2.0), Rheumatoid Arthritis and Systemic Lupus Erythematosus (AMP RA/SLE), Autoimmune and Immune-Mediated Diseases (AMP AIM), Common Metabolic Diseases (AMP CMD), Parkinson's Disease (AMP PD), Type 2 Diabetes (AMP T2D), Parkinson's Disease and Related Disorders (AMP PDRD).
  • How the Center will fill in critical multi-omic (bulk and single cell) data gaps using existing biosamples from the various cohorts and biobanks affiliated with the AMP program.
  • How the Center will conduct harmonization of compatible cross-disease datasets and distribution of newly generated data, systems biology data models and other analytical outputs.
  • How the Center will leverage multidimensional data from three or more chronic diseases across the following chronic disease groups: autoimmune, cardiometabolic, neurodegenerative and neuropsychiatric (among the selected diseases one must be neurodegenerative and one must be autoimmune).
  • How the Center will establish a multiscale analysis framework that will use existing and develop new computational tools (including AI/ML approaches) to conduct a series of cross-disease systems biology analyses aimed at addressing scientific questions with high translational value. 

Letters of Support: Provide letters of support providing evidence of institutional support and commitment, as well as access to critical facilities, equipment, resources, biospecimens, or collaborations.

Resource Sharing Plan:
Individuals are required to comply with the instructions for the Resource Sharing Plans as provided in the How to Apply - Application Guide.

Other Plan(s): 

All instructions in the How to Apply- Application Guide must be followed, with the following additional instructions:

  • A Data Management and Sharing Plan (DMS Plan) is required for any NIH-funded or conducted research that will generate scientific data. Applicants must submit the DMS Plan at the time of application using the NIH DMS Plan Format Page. The DMS Plan must address the elements in the structured format. Where the DMS Plan Format Page requires a "Yes or No" response, no additional narrative is allowed. The Data Management and Sharing (DMS) Plan must be provided in the Overall component.
  • Recipients must use NIH-approved data repositories (https://grants.nih.gov/policy-and-compliance/policy-topics/sharing-policies/dms) that may include but are not limited to ImmPort, Bioinformatics Resource Centers (BRCs), mapMECFS, Immune Epitope Database (IEDB), Accessing NIAID Clinical Trails Data etc. Recipients may further disseminate data, results, and analyses through other established repositories, and/or work with their institutional library-supported repository to self-publish all useful and usable data as a foundation for further study. Dissemination in NIH-supported repositories enables indexing and discoverability through the NIAID Data Ecosystem (NDE). 

Appendix:

Only limited items are allowed in the Appendix. Follow all instructions for the Appendix as described in How to Apply- Application Guide; any instructions provided here are in addition to the How to Apply - Application Guide instructions.

PHS Human Subjects and Clinical Trials Information (Overall)

When involving human subjects research, clinical research, and/or NIH-defined clinical trials follow all instructions for the PHS Human Subjects and Clinical Trials Information form in the How to Apply - Application Guide, with the following additional instructions:

If you answered "Yes" to the question "Are Human Subjects Involved?" on the R&R Other Project Information form, there must be at least one human subjects study record using the Study Record: PHS Human Subjects and Clinical Trials Information form or a Delayed Onset Study record within the application. The study record(s) must be included in the component(s) where the work is being done, unless the same study spans multiple components. To avoid the creation of duplicate study records, a single study record with sufficient information for all involved components must be included in the Overall component when the same study spans multiple components.

Study Record: PHS Human Subjects and Clinical Trials Information

All instructions in the How to Apply - Application Guide must be followed.

Delayed Onset Study

Note: Delayed onset does NOT apply to a study that can be described but will not start immediately (i.e., delayed start). All instructions in the How to Apply- Application Guide must be followed.

PHS Assignment Request Form (Overall)

All instructions in the How to Apply- Application Guide must be followed.

Administrative Core

When preparing your application, use Component Type 'Admin Core.'

All instructions in the How to Apply- Application Guide must be followed, with the following additional instructions, as noted. 

SF424 (R&R) Cover (Administrative Core)

Complete only the following fields:

  • Applicant Information
  • Type of Applicant (optional)
  • Descriptive Title of Applicant's Project
  • Proposed Project Start/Ending Dates

PHS 398 Cover Page Supplement (Administrative Core)

Enter Human Embryonic Stem Cells in each relevant component.

Research & Related Other Project Information (Administrative Core)

Human Subjects: Answer only the 'Are Human Subjects Involved?' and 'Is the Project Exempt from Federal regulations?' questions.

Vertebrate Animals: Answer only the 'Are Vertebrate Animals Used?' question.

Project Narrative: Do not complete. Note: ASSIST screens will show an asterisk for this attachment indicating it is required. However, eRA systems only enforce this requirement in the Overall component and applications will not receive an error if omitted in other components.

Project/Performance Site Location(s) (Administrative Core)

List all performance sites that apply to the specific component.

Note: The Project Performance Site form allows up to 300 sites, prior to using additional attachment for additional entries.

Research & Related Senior/Key Person Profile (Administrative Core)

  • In the Project Director/Principal Investigator section of the form, use Project Role of 'Other' with Category of 'Core Lead' and provide a valid eRA Commons ID in the Credential field.
  • In the additional Senior/Key Profiles section, list Senior/Key persons that are working in the component.
  • Include a single Biographical Sketch for each Senior/Key person listed in the application regardless of the number of components in which they participate. When a Senior/Key person is listed in multiple components, the Biographical Sketch can be included in any one component.
  • If more than 100 Senior/Key persons are included in a component, the Additional Senior Key Person attachments should be used.
  • The Administrative Core will be headed by the contact PD/PI of the application.
  • Within the Common Forms for Biographical Sketch and Current and Pending (Other) Support and NIH Biographical Sketch Supplement, highlight the experience, expertise, and ability of the Core lead and key personnel to manage all aspects of the Administrative Core. 

Budget (Administrative Core)

Budget forms appropriate for the specific component will be included in the application package.

Include costs for the following in the budget section:

Include funds to travel to two-day meetings: initial Kick-Off Meeting and to the Annual Programmatic Meeting for all Centers funded under this NOFO starting the second year of award. Each Center should fund travel and attendance at yearly meetings by the PD(s)/PI(s), the Project Leads, Core Leads, and other Key Personnel. These meetings are anticipated to be held at a location at/near Bethesda, Maryland or at another agreed-upon site following consultation with NIH staff. Travel and per diem costs to attend the initial Kick-Off Meeting and Annual Programmatic Meeting must be included in the budget; costs associated with organizing the Annual Programmatic Meeting are not allowable expenses.

Funds for the overall administrative efforts for the outreach activities should be requested beginning in year 2.

The Core Lead must commit at least 0.6 person-months effort to the Administrative Core.

Funds for personnel to participate in Program-wide working groups (e.g., Data Dissemination Working Groups, Modeling Working Groups, cross-center workshops) should be requested for each year.   

For SBI Centers, the budget must include a single line item for Opportunities Funds on the Other Direct Costs category of the Administrative Core. This cost must not exceed $2 million in direct costs/year in years 2-5 to support one to six Collaborative Projects per year. 

Note: The R&R Budget form included in many of the component types allows for up to 100 Senior/Key Persons in section A and 100 Equipment Items in section C prior to using attachments for additional entries. All other SF424 (R&R) instructions apply.

PHS 398 Research Plan (Administrative Core)

Specific Aims: Briefly describe the broad objectives and goals and the proposed activities and services of the proposed Administrative Core.

Research Strategy: Describe plans and procedures for establishing and effectively managing an Administrative Core that provides the organizational and administrative capacity to ensure the following:

  • Managing, coordinating, and supervising the entire range of Center activities; monitoring progress; and ensuring that the overall project management plan is implemented effectively and within proposed timelines, which includes sponsoring activities to advance the Center's activities and goals.
  • Communicating and collaborating with the Project Scientist, Program Officer or other NIH staff.
  • Assisting other Cores and Research Project Leaders with administrative aspects of their projects, such as gathering of annual progress reports, monitoring progress and facilitating other communications with award recipients.
  • Communicating with other Centers regarding collaboration and coordination of activities and projects.
  • Ensuring the rapid dissemination of all data and other research resources generated under the Center.
  • Ensuring that there are representatives for all Consortium-wide activities (e.g. working groups) including adoption of new technologies, harmonization of protocols and data standards and establishing guidelines for presentation and publication of the results of cross-functional projects. 
  • Ensuring outreach activities and engagement of new collaborators and instructional activities that promote use of datasets and resources resulting from the Center.

Management and Staffing Plan:

  • Describe how the organization of the Center and its management structure will form a cohesive Center that provides scientific and administrative oversight of all Center Cores and Research Projects.
  • Provide an overview of how the Research Projects will be coordinated, integrated, and scientifically and technically managed to answer the scientific questions and hypotheses proposed within the application and within the scope of the NOFO.
  • Describe the structure and roles of the administrative and scientific staff.

For CIDSB only: Outreach Activities Plan 

  • Describe outreach activities that will inform researchers about the approaches and resources (datasets, analysis tools, predictive models) utilized and generated under this initiative and promote collaborations with the pertinent scientific communities.

For SBI only: Opportunities Funds for Collaborative Projects Plan  

  • Provide a plan to administer the SBI Opportunities Funds to support 1 – 6 Collaborative Projects starting in year 2.
  • Describe in detail how the Core will solicit, review, and manage collaboration requests from external researchers for Collaborative Projects. 
  • Describe the team plans for disbursing and tracking SBI Opportunities Funds.
  • Outline how Collaborative Project funding decisions will be made in consultation with NIH staff. 

Letters of Support: Provide letters of support for the leadership qualifications and experience of the Administrative Core leaders. Provide a letter of support from the applicant institution stating the commitment to administering the funds as described in the Opportunities Funds for Collaborative Projects Plan if selected by the NIH.

Resource Sharing Plan: Individuals are required to comply with the instructions for the Resource Sharing Plans as provided in the How to Apply- Application Guide.

Other Plan(s):

All instructions in the How to Apply - Application Guide must be followed, with the following additional instructions: 

  • Do not include a Data Management and Sharing (DMS) Plan within this Component. If a DMS Plan is required for this NOFO, it must be included within the Overall Component. 

Appendix:

Only limited items are allowed in the Appendix. Follow all instructions for the How to Apply- Application Guide; any instructions provided here are in addition to those in the How to Apply- Application Guide instructions.

PHS Human Subjects and Clinical Trials Information (Administrative Core)

When involving human subjects research, clinical research, and/or NIH-defined clinical trials follow all instructions for the PHS Human Subjects and Clinical Trials Information form in the How to Apply- Application Guide, with the following additional instructions:

If you answered "Yes" to the question "Are Human Subjects Involved?" on the R&R Other Project Information form, you must include at least one human subjects study record using the Study Record: PHS Human Subjects and Clinical Trials Information form or a Delayed Onset Study record.

Study Record: PHS Human Subjects and Clinical Trials Information

All instructions in the How to Apply- Application Guide must be followed.

Delayed Onset Study

Note: Delayed onset does NOT apply to a study that can be described but will not start immediately (i.e., delayed start). All instructions in the How to Apply- Application Guide must be followed.

Data and Modeling Core

When preparing your application, use Component Type 'DM Core.'

All instructions in the How to Apply- Application Guide must be followed, with the following additional instructions, as noted. 

SF424 (R&R) Cover (Data and Modeling Core)

Complete only the following fields:

  • Applicant Information
  • Type of Applicant (optional)
  • Descriptive Title of Applicant's Project
  • Proposed Project Start/Ending Dates

PHS 398 Cover Page Supplement (Data and Modeling Core)

Enter Human Embryonic Stem Cells in each relevant component.

Research & Related Other Project Information (Data and Modeling Core)

Human Subjects: Answer only the 'Are Human Subjects Involved?' and 'Is the Project Exempt from Federal regulations?' questions.

Vertebrate Animals: Answer only the 'Are Vertebrate Animals Used?' question.

Project Narrative: Do not complete. Note: ASSIST screens will show an asterisk for this attachment indicating it is required. However, eRA systems only enforce this requirement in the Overall component and applications will not receive an error if omitted in other components.

Project/Performance Site Location(s) (Data and Modeling Core)

List all performance sites that apply to the specific component.

Note: The Project Performance Site form allows up to 300 sites, prior to using additional attachment for additional entries.

Research & Related Senior/Key Person Profile (Data and Modeling Core)

  • In the Project Director/Principal Investigator section of the form, use Project Role of 'Other' with Category of 'Core Lead' and provide a valid eRA Commons ID in the Credential field.
  • In the additional Senior/Key Profiles section, list Senior/Key persons that are working in the component.
  • Include a single Biographical Sketch for each Senior/Key person listed in the application regardless of the number of components in which they participate. When a Senior/Key person is listed in multiple components, the Biographical Sketch can be included in any one component.
  • If more than 100 Senior/Key persons are included in a component, the Additional Senior Key Person attachments should be used. 
  • Within the Common Forms for Biographical Sketch and Current and Pending (Other) Support and NIH Biographical Sketch Supplement, highlight the experience, expertise, and ability of the Core Lead and key personnel to manage all aspects of the Core. 

Budget (Data and Modeling Core)

Budget forms appropriate for the specific component will be included in the application package.

Include the following:

  • Funds to support central data storage, data processing, data use, and information security systems for the Center; and to support the submission of data, data analyses, and bioinformatics/computational tools to NIH approved databases, or other databases designated by NIH.
  • Funds to support the submission of the predictive models and computational/statistical tools to NIH approved databases, or other databases designated by NIH.
  • Funds to support the development, validation, and implementation of computational and statistical tools, machine learning algorithms, and statistical methods necessary for all aspects of building predictive models.
  • The Core Lead must commit at least 0.6 person-months effort to the Core.

Note: The R&R Budget form included in many of the component types allows for up to 100 Senior/Key Persons in section A and 100 Equipment Items in section C prior to using attachments for additional entries. All other SF424 (R&R) instructions apply.

PHS 398 Research Plan (Data and Modeling Core)

Specific Aims: Briefly describe the broad objectives and goals and the proposed activities and services of the proposed Data and Modeling Core.

Research Strategy: Describe plans and procedures for establishing and effectively managing a Data and Modeling Core. Include the following:

  • Core Strategy and Alignment with Center Goals
    • Describe how the Core's activities will advance the overall goals of the Center and justify the methods and approaches used to achieve its aims.
    • Explain how the Core's modeling framework will enable iterative application, validation, and refinement of predictive models.
    • Describe how the Core will contribute to Research Project experimental design, data integration, and predictive model development.
  • Data Stewardship and Infrastructure
    • Describe plans to establish processes for data stewardship, sample tracking, and monitoring of Center and collaborator activities.
    • Describe plans to develop and maintain a public website to share information about the Center and its resources, including datasets, predictive models, and reagents. 
    • Describe methods and approaches for structuring, annotating, harmonizing, documenting, and integrating data, metadata, computational workflows, code, and predictive models to support interoperability, reuse, reproducibility, and AI-readiness across NIH-relevant platforms and resources, including the NIAID Data Ecosystem (for CIDSB Centers).
  • Methods Development and Predictive Modeling
    • Describe plans to develop and maintain state-of-art and innovative bioinformatics, computational, machine learning, and statistical methods for systems-level analysis of Research Project datasets, with the goal of generating predictive models that increase efficiency and precision.
    • Describe how relevant non-omics data–including behavioral, clinical, EHR, drug susceptibility, surveillance, environmental, and immunological data–will be incorporated into predictive models.
  • Collaboration, Community Engagement 
    • Describe plans to collaborate with other Centers to develop and validate new methods, software, and approaches for infectious disease modeling.
    • Describe plans to develop SOPs, protocols, and analytical methods for dissemination to the broader scientific community.
  • Describe how the Core will draw on data from the Research Projects and other sources, to model host–pathogen, microbiome and inflammation interactions and dynamics. 
  • Describe how the Core will support study design through statistical and computational expertise and ensure that resulting models are publicly available and suitable for clinically relevant applications.
  • Describe how the Core will develop new and improved bioinformatics tools. 
  • Describe innovative mathematical modelling and computational method development to link different omics modalities and define functionalities, including a uniform pipeline for single-cell datasets to minimize reprocessing of data across the Consortium, approaches to standardize production of datasets that are AI-ready and secure workspaces for AI analyses, and computational pipelines and workflows enabling systematic integration of datasets into pathways.
  • Describe development of tools for network analysis and data visualization to identify pathways and signaling nodes of interest that could be leveraged for improved treatment.

Letters of Support: Provide letters of support only if necessary to document access to a shared resource.

Resource Sharing Plan: Individuals are required to comply with the instructions for the Resource Sharing Plans as provided in the How to Apply- Application Guide.

Other Plan(s):

All instructions in the How to Apply - Application Guide must be followed, with the following additional instructions: 

  • Do not include a Data Management and Sharing (DMS) Plan within this Component. If a DMS Plan is required for this NOFO, it must be included within the Overall Component. 

Appendix:

Only limited items are allowed in the Appendix. Follow all instructions for the How to Apply- Application Guide; any instructions provided here are in addition to those in the How to Apply- Application Guide instructions.

PHS Human Subjects and Clinical Trials Information (Data and Modeling Core)

When involving human subjects research, clinical research, and/or NIH-defined clinical trials follow all instructions for the PHS Human Subjects and Clinical Trials Information form in the How to Apply- Application Guide, with the following additional instructions:

If you answered "Yes" to the question "Are Human Subjects Involved?" on the R&R Other Project Information form, you must include at least one human subjects study record using the Study Record: PHS Human Subjects and Clinical Trials Information form or a Delayed Onset Study record.

Study Record: PHS Human Subjects and Clinical Trials Information

All instructions in the How to Apply- Application Guide must be followed.

Delayed Onset Study

Note: Delayed onset does NOT apply to a study that can be described but will not start immediately (i.e., delayed start). All instructions in the How to Apply- Application Guide must be followed.

Technology Development Core 

When preparing your application, use Component Type 'TD Core.'

All instructions in the How to Apply- Application Guide must be followed, with the following additional instructions, as noted. 

SF424 (R&R) Cover (Technology Development Core)

Complete only the following fields:

  • Applicant Information
  • Type of Applicant (optional)
  • Descriptive Title of Applicant's Project
  • Proposed Project Start/Ending Dates

PHS 398 Cover Page Supplement (Technology Development Core)

Enter Human Embryonic Stem Cells in each relevant component.

Research & Related Other Project Information (Technology Development Core)

Human Subjects: Answer only the 'Are Human Subjects Involved?' and 'Is the Project Exempt from Federal regulations?' questions.

Vertebrate Animals: Answer only the 'Are Vertebrate Animals Used?' question.

Project Narrative: Do not complete. Note: ASSIST screens will show an asterisk for this attachment indicating it is required. However, eRA systems only enforce this requirement in the Overall component and applications will not receive an error if omitted in other components.

Project/Performance Site Location(s) (Technology Development Core)

List all performance sites that apply to the specific component.

Note: The Project Performance Site form allows up to 300 sites, prior to using additional attachment for additional entries.

Research & Related Senior/Key Person Profile (Technology Development Core)

  • In the Project Director/Principal Investigator section of the form, use Project Role of 'Other' with Category of 'Core Lead' and provide a valid eRA Commons ID in the Credential field.
  • In the additional Senior/Key Profiles section, list Senior/Key persons that are working in the component.
  • Include a single Biographical Sketch for each Senior/Key person listed in the application regardless of the number of components in which they participate. When a Senior/Key person is listed in multiple components, the Biographical Sketch can be included in any one component.
  • If more than 100 Senior/Key persons are included in a component, the Additional Senior Key Person attachments should be used.

Budget (Technology Development Core)

Budget forms appropriate for the specific component will be included in the application package.

The Core Lead must commit at least 0.6 person-months effort to the Core.

Note: The R&R Budget form included in many of the component types allows for up to 100 Senior/Key Persons in section A and 100 Equipment Items in section C prior to using attachments for additional entries. All other SF424 (R&R) instructions apply.

PHS 398 Research Plan (Technology Development Core)

Specific Aims: Briefly describe the broad objectives and goals and the proposed activities and services of the proposed Technology Core.

Research Strategy: Describe plans and procedures for establishing and effectively managing a Technology Development Core. Include the following:

  • Describe how the Core activities will contribute to meeting the Center's goals and objectives and explain the rationale for selection of the general methods, technologies, and approaches proposed to accomplish the specific aims of the Center's Research Projects.
  • Detail how the Core will support the concurrent utilization of high throughput approaches, including omics approaches, in addition to genomics and transcriptomics.
  • Describe how the Core will evaluate, develop and incorporate enhancements, modifications and improvements in existing omics technologies, platforms, pipelines and resources to increase efficiency and decrease cost.
  • Describe how high throughput (HTP) technologies are currently in place for analyzing human clinical samples.
  • Describe how the Core will continue to employ innovative strategies to address new scientific opportunities and technologies in a flexible and timely manner.
  • Describe how the Core will develop standard operating procedures (SOPs), protocols and methods for new and improved technologies, project design, and analysis methods and tools for dissemination into the broader scientific community.

Letters of Support: Provide letters of support only if necessary to document access to a shared resource. 

Resource Sharing Plan: Individuals are required to comply with the instructions for the Resource Sharing Plans as provided in the How to Apply- Application Guide.

Other Plan(s):

All instructions in the How to Apply - Application Guide must be followed, with the following additional instructions: 

  • Do not include a Data Management and Sharing (DMS) Plan within this Component. If a DMS Plan is required for this NOFO, it must be included within the Overall Component. 

Appendix:

Only limited items are allowed in the Appendix. Follow all instructions for the How to Apply- Application Guide; any instructions provided here are in addition to those in the How to Apply- Application Guide instructions.

PHS Human Subjects and Clinical Trials Information (Technology Development Core)

When involving human subjects research, clinical research, and/or NIH-defined clinical trials follow all instructions for the PHS Human Subjects and Clinical Trials Information form in the How to Apply- Application Guide, with the following additional instructions:

If you answered "Yes" to the question "Are Human Subjects Involved?" on the R&R Other Project Information form, you must include at least one human subjects study record using the Study Record: PHS Human Subjects and Clinical Trials Information form or a Delayed Onset Study record.

Study Record: PHS Human Subjects and Clinical Trials Information

All instructions in the How to Apply- Application Guide must be followed.

Delayed Onset Study

Note: Delayed onset does NOT apply to a study that can be described but will not start immediately (i.e., delayed start). All instructions in the How to Apply- Application Guide must be followed.

Validation and Translation Core 

When preparing your application, use Component Type 'VT Core'

All instructions in the How to Apply- Application Guide must be followed, with the following additional instructions, as noted. 

SF424 (R&R) Cover (Validation and Translation Core)

Complete only the following fields:

  • Applicant Information
  • Type of Applicant (optional)
  • Descriptive Title of Applicant's Project
  • Proposed Project Start/Ending Dates

PHS 398 Cover Page Supplement (Validation and Translation Core)

Enter Human Embryonic Stem Cells in each relevant component.

Research & Related Other Project Information (Validation and Translation Core)

Human Subjects: Answer only the 'Are Human Subjects Involved?' and 'Is the Project Exempt from Federal regulations?' questions.

Vertebrate Animals: Answer only the 'Are Vertebrate Animals Used?' question.

Project Narrative: Do not complete. Note: ASSIST screens will show an asterisk for this attachment indicating it is required. However, eRA systems only enforce this requirement in the Overall component and applications will not receive an error if omitted in other components.

Project/Performance Site Location(s) (Validation and Translation Core)

List all performance sites that apply to the specific component.

Note: The Project Performance Site form allows up to 300 sites, prior to using additional attachment for additional entries.

Research & Related Senior/Key Person Profile (Validation and Translation Core)

  • In the Project Director/Principal Investigator section of the form, use Project Role of 'Other' with Category of 'Core Lead' and provide a valid eRA Commons ID in the Credential field.
  • In the additional Senior/Key Profiles section, list Senior/Key persons that are working in the component.
  • Include a single Biographical Sketch for each Senior/Key person listed in the application regardless of the number of components in which they participate. When a Senior/Key person is listed in multiple components, the Biographical Sketch can be included in any one component.
  • If more than 100 Senior/Key persons are included in a component, the Additional Senior Key Person attachments should be used.

Budget (Validation and Translation Core)

Budget forms appropriate for the specific component will be included in the application package.

The Core Lead must commit at least 0.6 person-months effort to the Core.

Note: The R&R Budget form included in many of the component types allows for up to 100 Senior/Key Persons in section A and 100 Equipment Items in section C prior to using attachments for additional entries. All other SF424 (R&R) instructions apply.

PHS 398 Research Plan (Validation and Translation Core)

Specific Aims: Briefly describe the broad objectives and goals and the proposed activities and services of the proposed Validation and Translation Core.

Research Strategy: Describe plans and procedures for establishing and effectively managing a Validation and Translation Core. Include the following:

  • Describe how the Core activities will contribute to meeting the Center's goals and objectives and explain the rationale for selection of the general methods, technologies, and approaches proposed to accomplish the specific aims of the Center's Research Projects.
  • Detail how the Core will support activities for preclinical proof-of-concept validation of biomarkers, predictive models, or other findings.
  • Describe timelines and validation quantitative criteria for proof-of-concept that could support go/no-go preclinical development decisions. 
  • Describe how the Core supports both comprehensive molecular profiling and targeted analyses, including quantitative proteomics and validation of protein–protein and protein–DNA interactions in human clinical samples.
  • Describe how the Core will validate computational and AI models using complementary experimental and translational platforms, including cell-based assays, new approach methodologies (NAMs), animal models, and RWDs. By integrating findings across preclinical models and existing patient-derived datasets, the Core will support biomarker and target prioritization.

Letters of Support: Provide letters of support only if necessary to document access to a shared resource. 

Resource Sharing Plan: Individuals are required to comply with the instructions for the Resource Sharing Plans as provided in the How to Apply- Application Guide.

Other Plan(s):

All instructions in the How to Apply - Application Guide must be followed, with the following additional instructions: 

  • Do not include a Data Management and Sharing (DMS) Plan within this Component. If a DMS Plan is required for this NOFO, it must be included within the Overall Component. 

Appendix:

Only limited items are allowed in the Appendix. Follow all instructions for the How to Apply- Application Guide; any instructions provided here are in addition to those in the How to Apply- Application Guide instructions.

PHS Human Subjects and Clinical Trials Information (Validation and Translation Core)

When involving human subjects research, clinical research, and/or NIH-defined clinical trials follow all instructions for the PHS Human Subjects and Clinical Trials Information form in the How to Apply- Application Guide, with the following additional instructions:

If you answered "Yes" to the question "Are Human Subjects Involved?" on the R&R Other Project Information form, you must include at least one human subjects study record using the Study Record: PHS Human Subjects and Clinical Trials Information form or a Delayed Onset Study record.

Study Record: PHS Human Subjects and Clinical Trials Information

All instructions in the How to Apply- Application Guide must be followed.

Delayed Onset Study

Note: Delayed onset does NOT apply to a study that can be described but will not start immediately (i.e., delayed start). All instructions in the How to Apply- Application Guide must be followed.

Biospecimen Collection and Processing Core

When preparing your application, use Component Type 'BCP Core' 

All instructions in the How to Apply- Application Guide must be followed, with the following additional instructions, as noted. 

SF424 (R&R) Cover (Biospecimen Collection and Processing Core)

Complete only the following fields:

  • Applicant Information
  • Type of Applicant (optional)
  • Descriptive Title of Applicant's Project
  • Proposed Project Start/Ending Dates

PHS 398 Cover Page Supplement (Biospecimen Collection and Processing Core)

Enter Human Embryonic Stem Cells in each relevant component.

Research & Related Other Project Information (Biospecimen Collection and Processing Core)

Human Subjects: Answer only the 'Are Human Subjects Involved?' and 'Is the Project Exempt from Federal regulations?' questions.

Vertebrate Animals: Answer only the 'Are Vertebrate Animals Used?' question.

Project Narrative: Do not complete. Note: ASSIST screens will show an asterisk for this attachment indicating it is required. However, eRA systems only enforce this requirement in the Overall component and applications will not receive an error if omitted in other components.

Project/Performance Site Location(s) (Biospecimen Collection and Processing Core)

List all performance sites that apply to the specific component.

Note: The Project Performance Site form allows up to 300 sites, prior to using additional attachment for additional entries.

Research & Related Senior/Key Person Profile (Biospecimen Collection and Processing Core)

  • In the Project Director/Principal Investigator section of the form, use Project Role of 'Other' with Category of 'Core Lead' and provide a valid eRA Commons ID in the Credential field.
  • In the additional Senior/Key Profiles section, list Senior/Key persons that are working in the component.
  • Include a single Biographical Sketch for each Senior/Key person listed in the application regardless of the number of components in which they participate. When a Senior/Key person is listed in multiple components, the Biographical Sketch can be included in any one component.
  • If more than 100 Senior/Key persons are included in a component, the Additional Senior Key Person attachments should be used.

Budget (Biospecimen Collection and Processing Core)

Budget forms appropriate for the specific component will be included in the application package.

The Core Lead must commit at least 0.6 person-months effort to the Core.

Note: The R&R Budget form included in many of the component types allows for up to 100 Senior/Key Persons in section A and 100 Equipment Items in section C prior to using attachments for additional entries. All other SF424 (R&R) instructions apply.

PHS 398 Research Plan (Biospecimen Collection and Processing Core)

Specific Aims: Briefly describe the broad objectives and goals and the proposed activities and services of the proposed Biospecimen Collection and Processing Core.

Research Strategy: Describe plans and procedures for establishing and effectively managing a Biospecimen Collection and Processing Core. Include the following: 

  • Describe how the Core activities will contribute to meeting the Center's goals and objectives and explain the rationale for selection of the general methods, technologies, and approaches proposed to accomplish the specific aims of the Center's Research Projects.
  • Describe cohort characteristics, sample acquisition pipeline and informed consent.
  • Describe how the Core will maximize the utility of data generated by the Center, by establishing consents that explicitly allow broad data sharing and re-use as well as allow sharing samples with other NIH-funded projects of related scope.
  • For CIDSB, describe existing cohorts from people living with chronic illnesses to evaluate the interaction with acute infections; and cohorts of people with acute infection to follow their longitudinal risks to develop post-acute infections.
  • Obtain access to, or the ability to obtain, human samples of sufficient quality along with extensive metadata to meet the research objectives within the timeline of the Center.
  • Describe how the Core will utilize a wide range of omics technologies that will support systems biology.

Letters of Support: Provide letters of support only if necessary to document access to a shared resource.

Resource Sharing Plan: Individuals are required to comply with the instructions for the Resource Sharing Plans as provided in the How to Apply- Application Guide.

Other Plan(s):

All instructions in the How to Apply - Application Guide must be followed, with the following additional instructions: 

  • Do not include a Data Management and Sharing (DMS) Plan within this Component. If a DMS Plan is required for this NOFO, it must be included within the Overall Component. 

Appendix:

Only limited items are allowed in the Appendix. Follow all instructions for the How to Apply- Application Guide; any instructions provided here are in addition to those in the How to Apply- Application Guide instructions.

PHS Human Subjects and Clinical Trials Information (Biospecimen Collection and Processing Core)

When involving human subjects research, clinical research, and/or NIH-defined clinical trials follow all instructions for the PHS Human Subjects and Clinical Trials Information form in the How to Apply- Application Guide, with the following additional instructions:

If you answered "Yes" to the question "Are Human Subjects Involved?" on the R&R Other Project Information form, you must include at least one human subjects study record using the Study Record: PHS Human Subjects and Clinical Trials Information form or a Delayed Onset Study record.

Study Record: PHS Human Subjects and Clinical Trials Information

All instructions in the How to Apply- Application Guide must be followed.

Delayed Onset Study

Note: Delayed onset does NOT apply to a study that can be described but will not start immediately (i.e., delayed start). All instructions in the How to Apply- Application Guide must be followed.

Research Projects

When preparing your application, use Component Type 'Project.'

All instructions in the How to Apply- Application Guide must be followed, with the following additional instructions, as noted. 

SF424 (R&R) Cover (Research Projects)

Complete only the following fields:

  • Applicant Information
  • Type of Applicant (optional)
  • Descriptive Title of Applicant's Project
  • Proposed Project Start/Ending Dates

PHS 398 Cover Page Supplement (Research Projects)

Enter Human Embryonic Stem Cells in each relevant component.

Research & Related Other Project Information (Research Projects)

Human Subjects: Answer only the 'Are Human Subjects Involved?' and 'Is the Project Exempt from Federal regulations?' questions.

Vertebrate Animals: Answer only the 'Are Vertebrate Animals Used?' question.

Project Narrative: Do not complete. Note: ASSIST screens will show an asterisk for this attachment indicating it is required. However, eRA systems only enforce this requirement in the Overall component and applications will not receive an error if omitted in other components.

Project/Performance Site Location(s) (Research Projects)

List all performance sites that apply to the specific component.

Note: The Project Performance Site form allows up to 300 sites, prior to using additional attachment for additional entries.

Research & Related Senior/Key Person Profile (Research Projects)

  • In the Project Director/Principal Investigator section of the form, use Project Role of 'Other' with Category of 'Project Lead' and provide a valid eRA Commons ID in the Credential field.
  • In the additional Senior/Key Profiles section, list Senior/Key persons that are working in the component.
  • Include a single Biographical Sketch for each Senior/Key person listed in the application regardless of the number of components in which they participate. When a Senior/Key person is listed in multiple components, the Biographical Sketch can be included in any one component.
  • If more than 100 Senior/Key persons are included in a component, the Additional Senior Key Person attachments should be used.

Budget (Research Projects)

Budget forms appropriate for the specific component will be included in the application package.

The Project Lead must commit at least 0.6 person-months effort to the project.

Note: The R&R Budget form included in many of the component types allows for up to 100 Senior/Key Persons in section A and 100 Equipment Items in section C prior to using attachments for additional entries. All other SF424 (R&R) instructions apply.

PHS 398 Research Plan (Research Projects)

Specific Aims: Briefly describe the broad objectives and goals of the proposed Research Project. Concisely and realistically describe the hypothesis or hypotheses to be tested. State the Research Project's relationship to the Center's goals and how they relate to the other Research Projects and Cores.

Research Strategy: Describe the significance of the proposed Research Project and how it will advance the overall goals and objectives of the Center. Describe the expertise of the multidisciplinary investigative team and how the team will work collaboratively to accomplish the project aims. Provide the leadership plan for the Research Project, including the organizational structure, roles and responsibilities of key personnel, and the overall management strategy. Describe the technologies that will be developed and/or applied in coordination with the Scientific Cores to accomplish the project goals. Include the following:

  • Describe how existing and /or experimental data will be generated, analyzed, and integrated into predictive, system-wide models.
  • If applicable, describe any novel methodologies, their advantages relative to existing approaches, potential challenges and limitations, and alternative strategies to achieve the proposed aims.
  • Describe the samples to be used. For human samples, identify the source and provide evidence of suitability, including relevant metadata, expected quality and quantity for omics profiling, and procedures for de-identification, as appropriate.
  • Explain how patient samples and in vitro and/or in vivo experimental approaches will be used to identify predictive biosignatures and to develop, apply, validate, and refine predictive models.
  • Describe how the proposed methods, technologies, and strategies, are relevant to the biological significance of the work.
  • Describe how the predictive model will subsequently be used for more precise diagnosis, prevention, and interventions.

Letters of Support: Provide letters of support only if necessary to document any critical external collaborations to access to any critical reagents or resources outside of the Center. 

Resource Sharing Plan: Individuals are required to comply with the instructions for the Resource Sharing Plans as provided in the How to Apply- Application Guide.

Other Plan(s):

All instructions in the How to Apply - Application Guide must be followed, with the following additional instructions: 

  • Do not include a Data Management and Sharing (DMS) Plan within this Component. If a DMS Plan is required for this NOFO, it must be included within the Overall Component. 

Appendix:

Only limited items are allowed in the Appendix. Follow all instructions for the How to Apply- Application Guide; any instructions provided here are in addition to those in the How to Apply- Application Guide instructions.

PHS Human Subjects and Clinical Trials Information (Research Projects)

When involving human subjects research, clinical research, and/or NIH-defined clinical trials follow all instructions for the PHS Human Subjects and Clinical Trials Information form in the How to Apply- Application Guide, with the following additional instructions:

If you answered "Yes" to the question "Are Human Subjects Involved?" on the R&R Other Project Information form, you must include at least one human subjects study record using the Study Record: PHS Human Subjects and Clinical Trials Information form or a Delayed Onset Study record.

Study Record: PHS Human Subjects and Clinical Trials Information

All instructions in the How to Apply- Application Guide must be followed.

Delayed Onset Study

Note: Delayed onset does NOT apply to a study that can be described but will not start immediately (i.e., delayed start). All instructions in the How to Apply- Application Guide must be followed.

3. Unique Entity Identifier and System for Award Management (SAM)

See Part 2. Section III.1 for information regarding the requirement for obtaining a unique entity identifier and for completing and maintaining active registrations in System for Award Management (SAM), NATO Commercial and Government Entity (NCAGE) Code (if applicable), eRA Commons, and Grants.gov

4. Submission Dates and Times

Part I. contains information about Key Dates and times. Applicants are encouraged to submit applications before the due date to ensure they have time to make any application corrections that might be necessary for successful submission. When a submission date falls on a weekend or Federal holiday, the application deadline is automatically extended to the next business day.

Organizations must submit applications to Grants.gov (the online portal to find and apply for grants across all Federal agencies) using ASSIST or other electronic submission systems. Applicants must then complete the submission process by tracking the status of the application in the eRA Commons, NIH's electronic system for grants administration. NIH and Grants.gov systems check the application against many of the application instructions upon submission. Errors must be corrected and a changed/corrected application must be submitted to Grants.gov on or before the application due date and time. If a Changed/Corrected application is submitted after the deadline, the application will be considered late. Applications that miss the due date and time are subjected to the NIH Grants Policy Statement Section 2.3.9.2 Electronically Submitted Applications.

Applicants are responsible for viewing their application before the due date in the eRA Commons to ensure accurate and successful submission.

Information on the submission process and a definition of on-time submission are provided in How to Apply- Application Guide.

5. Intergovernmental Review (E.O. 12372)

This initiative is not subject to intergovernmental review.

6. Funding Restrictions

All NIH awards are subject to the terms and conditions, cost principles, and other considerations described in the NIH Grants Policy Statement.

Pre-award costs are allowable only as described in the NIH Grants Policy Statement Section 7.9.1 Selected Items of Cost.

7. Other Submission Requirements and Information

Applications must be submitted electronically following the instructions described in the How to Apply - Application Guide. Paper applications will not be accepted.

For information on how applications will be automatically assembled for review and funding consideration after submission, refer to: http://grants.nih.gov/grants/ElectronicReceipt/files/Electronic_Multi-project_Application_Image_Assembly.pdf.

Applicants must complete all required registrations before the application due date. Section III. Eligibility Information contains information about registration.

For assistance with your electronic application or for more information on the electronic submission process, visit How to Apply - Application Guide. If you encounter a system issue beyond your control that threatens your ability to complete the submission process on-time, you must follow the Dealing with System Issues guidance. For assistance with application submission, contact the Application Submission Contacts in Section VII.

Important reminders:

All PD(s)/PI(s) and component Project Leads must include their eRA Commons ID in the Credential field of the Senior/Key Person Profile form. Failure to register in the Commons and to include a valid PD/PI Commons ID in the credential field will prevent the successful submission of an electronic application to NIH.

The applicant organization must ensure that the unique entity identifier provided on the application is the same identifier used in the organization's profile in the eRA Commons and for the System for Award Management. Additional information may be found in How to Apply - Application Guide. 

See more tips for avoiding common errors.

Upon receipt, applications will be evaluated for completeness and compliance with application instructions by the Center for Scientific Review and responsiveness by components of participating organizations, NIH. Applications that are incomplete, non-compliant and/or nonresponsive will not be reviewed. 

Mandatory Disclosure

Recipients or subrecipients must submit any information related to violations of federal criminal law involving fraud, bribery, or gratuity violations potentially affecting the federal award. See Mandatory Disclosures, 2 CFR 200.113 and NIH Grants Policy Statement Section 4.1.35.

Send written disclosures to the NIH Chief Grants Management Officer listed on the Notice of Award for the IC that funded the award and to the HHS Office of Inspector Grant Self Disclosure Program at grantdisclosures@oig.hhs.gov.

Post Submission Materials

Applicants are required to follow the instructions for post-submission materials, as described in the policy.

Section V. Application Review Information

1. Criteria

Only the review criteria described below will be considered in the review process. Applications submitted to NIH in support of the NIH mission are evaluated for scientific and technical merit through the NIH peer review system.

Overall Impact - Overall

Reviewers will provide an overall impact score to reflect their assessment of the likelihood for the project to exert a sustained, powerful influence on the research field(s) involved, in consideration of the following review criteria and additional review criteria (as applicable for the project proposed).

Scored Review Criteria - Overall

Reviewers will consider each of the review criteria below in the determination of scientific merit and give a separate score for each. An application does not need to be strong in all categories to be judged likely to have major scientific impact. For example, a project that by its nature is not innovative may be essential to advance a field.

Significance

Does the project address an important problem or a critical barrier to progress in the field? Is the prior research that serves as the key support for the proposed project rigorous? If the aims of the project are achieved, how will scientific knowledge, technical capability, and/or clinical practice be improved? How will successful completion of the aims change the concepts, methods, technologies, treatments, services, or preventative interventions that drive this field?

Specific to this NOFO:

  • To what extent will the Center generate valuable predictive models of the relationships between infections, inflammation, and chronic diseases?

Investigator(s)

Are the PD(s)/PI(s), collaborators, and other researchers well suited to the project? If Early Stage Investigators or those in the early stages of independent careers, do they have appropriate experience and training? If established, have they demonstrated an ongoing record of accomplishments that have advanced their field(s)? If the project is collaborative or multi-PD/PI, do the investigators have complementary and integrated expertise; are their leadership approach, governance and organizational structure appropriate for the project?

Innovation

Does the application challenge and seek to shift current research or clinical practice paradigms by utilizing novel theoretical concepts, approaches or methodologies, instrumentation, or interventions? Are the concepts, approaches or methodologies, instrumentation, or interventions novel to one field of research or novel in a broad sense? Is a refinement, improvement, or new application of theoretical concepts, approaches or methodologies, instrumentation, or interventions proposed?

Approach

Are the overall strategy, methodology, and analyses well-reasoned and appropriate to accomplish the specific aims of the project? Have the investigators included plans to address weaknesses in the rigor of prior research that serves as the key support for the proposed project? Have the investigators presented strategies to ensure a robust and unbiased approach, as appropriate for the work proposed? Are potential problems, alternative strategies, and benchmarks for success presented? If the project is in the early stages of development, will the strategy establish feasibility and will particularly risky aspects be managed? Have the investigators presented adequate plans to address relevant biological variables, such as sex, for studies in vertebrate animals or human subjects?

If the project involves human subjects and/or NIH-defined clinical research, are the plans to address:

1) the protection of human subjects from research risks, and
2) inclusion (or exclusion) of individuals on the basis of sex, race, and ethnicity, as well as the inclusion or exclusion of individuals of all ages (including children and older adults), justified in terms of the scientific goals and research strategy proposed?

Specific to this NOFO:

  • To what extent do all the individual Projects and Cores relate to the overall goals of the Center and provide a cohesive and synergistic whole?
  • How well justified are the plans for implementation of a systems biology approach in the Projects and Cores for the hypothesis being tested?
  • To what extent does the Center leverage systems-based approaches and longitudinal cohorts' data to better model the relationships between inflammation, infectious, and chronic diseases?

Environment

Will the scientific environment in which the work will be done contribute to the probability of success? Are the institutional support, equipment and other physical resources available to the investigators adequate for the project proposed? Will the project benefit from unique features of the scientific environment, subject populations, or collaborative arrangements?

Specific to this NOFO:

  • How well do the multi-disciplinary Centers leverage unique research resources and patient populations to advance understanding of the pathogens, inflammation and the relationships between chronic diseases they propose to study?

Scored Review Criteria – All Cores and Research Projects 

Reviewers will consider the review criteria below in the determination of scientific merit and provide an overall impact score (a single numerical score) for each Core and each Research Project.

Administrative Core

  • To what degree does the Administrative Core outline an effective plan to monitor research progress, collaboration, timelines and outreach plans to the broad scientific community?

Data and Modeling Core

  • How well will the Core bridge generated multiomics data and relevant non-omics data to promote practices and stewardship beyond the Center?
  • To what extent are the proposed plans to develop and maintain bioinformatics, computational, machine learning, and statistical methods sufficient to build predictive models? 
  • To what extent does the Core plan to develop and maintain state-of-the-art, modeling capabilities that increase efficiency and precision, while advancing new methods, models, algorithms and software?

Technology Development Core (if applicable)

  • How thorough and adequate are the Core's plan to evaluate, develop and incorporate enhancements, modifications and improvements in existing "omics", and other related technologies?

Validation and Translation Core (if applicable)

  • How does the Core provide rigorous proof-of-concept validation within the specified timelines, while also validating biomarkers and predictive models?

Biospecimen Collection and Processing Core

  • How well does the Core support the Center's goals by providing appropriate cohorts, high-quality samples, and sufficient clinical information from existing cohorts, or, if needed, a clear plan for collecting samples?
  • How well do the proposed methods and omics approaches fit the Research Projects, and to what extent do the consent and sharing plans support broad data sharing, sample sharing, and future longitudinal studies?

Research Projects

  • How well does the Research Project leverage multidisciplinary expertise, technologies, and approaches in coordination with Cores to overcome potential challenges or limitation to achieve the overall goals of the Center? 
  • How well will the Research Project enable predictive model implementation and subsequent use of modeling approaches to more precise diagnostic, prevention and interventions? 

Additional Review Criteria - Overall, Cores and Research Projects

As applicable for the project proposed, reviewers will evaluate the following additional items while determining scientific and technical merit, and in providing an overall impact score, but will not give separate scores for these items.

Protections for Human Subjects

For research that involves human subjects but does not involve one of the categories of research that are exempt under 45 CFR Part 46, the committee will evaluate the justification for involvement of human subjects and the proposed protections from research risk relating to their participation according to the following five review criteria: 1) risk to subjects, 2) adequacy of protection against risks, 3) potential benefits to the subjects and others, 4) importance of the knowledge to be gained, and 5) data and safety monitoring for clinical trials.

For research that involves human subjects and meets the criteria for one or more of the categories of research that are exempt under 45 CFR Part 46, the committee will evaluate: 1) the justification for the exemption, 2) human subjects involvement and characteristics, and 3) sources of materials. For additional information on review of the Human Subjects section, please refer to the Guidelines for the Review of Human Subjects.

This NOFO only accepts applications that do not propose clinical trials. Note: Applications may propose activities involving human subjects that are not deemed clinical trials.

Inclusion of Human Subjects Policies

When the proposed project involves human subjects and/or NIH-defined clinical research, the committee will evaluate the proposed plans for inclusion. For additional information on review of the Inclusion section, please refer to the Guidelines for the Review of Inclusion in Clinical Research. 

Vertebrate Animals

The committee will evaluate the involvement of live vertebrate animals as part of the scientific assessment according to the following three points: (1) a complete description of all proposed procedures including the species, strains, ages, sex, and total numbers of animals to be used; (2) justifications that the species is appropriate for the proposed research and why the research goals cannot be accomplished using an alternative non-animal model; and (3) interventions including analgesia, anesthesia, sedation, palliative care, and humane endpoints that will be used to limit any unavoidable discomfort, distress, pain and injury in the conduct of scientifically valuable research. Methods of euthanasia and justification for selected methods, if NOT consistent with the American Veterinary Medicine Association (AVMA) Guidelines for the Euthanasia of Animals, is also required but is found in a separate section of the application. For additional information on review of the Vertebrate Animals Section, please refer to the Worksheet for Review of the Vertebrate Animals Section.

Biohazards

Reviewers will assess whether materials or procedures proposed are potentially hazardous to research personnel and/or the environment, and if needed, determine whether adequate protection is proposed.

Resubmissions

For Resubmissions (as applicable), the committee will evaluate the application as now presented, taking into consideration the responses to comments from the previous scientific review group and changes made to the project.

Renewals

For Renewals (as applicable), the committee will consider the progress made in the last funding period.

Revisions

For Revisions (as applicable), the committee will consider the appropriateness of the proposed expansion of the scope of the project. If the Revision application relates to a specific line of investigation presented in the original application that was not recommended for approval by the committee, then the committee will consider whether the responses to comments from the previous scientific review group are adequate and whether substantial changes are clearly evident.

Additional Review Considerations - Overall, Cores and Research Projects

As applicable for the project proposed, reviewers will consider each of the following items, but will not give scores for these items, and should not consider them in providing an overall impact score.

Applications from Foreign Organizations

Reviewers will assess whether the project presents special opportunities for furthering research programs through the use of unusual talent, resources, populations, or environmental conditions that exist in other countries and either are not readily available in the United States or augment existing U.S. resources.

Select Agent Research

Reviewers will assess the information provided in this section of the application, including 1) the Select Agent(s) to be used in the proposed research, 2) the registration status of all entities where Select Agent(s) will be used, 3) the procedures that will be used to monitor possession use and transfer of Select Agent(s), and 4) plans for appropriate biosafety, biocontainment, and security of the Select Agent(s).

Resource Sharing Plans

Reviewers will comment on whether the Resource Sharing Plan(s) (e.g., Sharing Model Organisms) or the rationale for not sharing the resources, is reasonable.

Authentication of Key Biological and/or Chemical Resources:

For projects involving key biological and/or chemical resources, reviewers will comment on the brief plans proposed for identifying and ensuring the validity of those resources.

Budget and Period of Support

Reviewers will consider whether the budget and the requested period of support are fully justified and reasonable in relation to the proposed research.

2. Review and Selection Process

Applications will be evaluated for scientific and technical merit by (an) appropriate Scientific Review Group(s) convened by the Center for Scientific Review (CSR), in accordance with NIH peer review policies and practices, using the stated review criteria. Assignment to a Scientific Review Group will be shown in the eRA Commons.

As part of the scientific peer review, all applications will receive a written critique.

Applications may undergo a selection process in which only those applications deemed to have the highest scientific and technical merit (generally the top half of applications under review) will be discussed and assigned an overall impact score.

Requests for reconsideration of initial peer review will not be accepted for applications submitted in response to this NOFO.

Applications will be assigned on the basis of established PHS referral guidelines to the appropriate NIH Institute or Center. Applications will compete for available funds with all other recommended applications submitted in response to this NOFO. Following initial peer review, recommended applications will receive a second level of review by the National Advisory Allergy and Infectious Diseases Council. The following will be considered in making funding decisions:

  • Scientific and technical merit of the proposed project as determined by scientific peer review.
  • Availability of funds.
  • Relevance of the proposed project to program priorities.

Awarding institutes, centers, and offices may give priority to applications in the following areas:

National Institute on Allergy and Infectious Diseases (NIAID) - CIDSB

  • Applications that investigate the bidirectional interplay between infectious and chronic diseases. 
  • Studies that include multiple pathogens and chronic diseases.

National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIAMS) - SBI

  • Focus on diseases studied in Accelerating Medicines Partnership® (AMP®) and related NIH programs.
  • Focus on autoimmune systemic, rheumatic, and skin diseases.
  • Include diseases from at least two of the following chronic diseases groups: neurodegenerative, neuropsychiatric, and cardiometabolic. 

National Institute on Aging (NIA) - SBI

  • Focus on diseases studied in the Accelerating Medicines Partnership® (AMP®) and related NIH programs.
  • Focus on Alzheimer's Disease.
  • Include diseases from at least three of the following chronic diseases groups: neurodegenerative, neuropsychiatric, autoimmune, and cardiometabolic. 

Office of Autoimmune Disease Research (OADR-ORWH)  

  • OADR-ORWH may consider cofounding applications advancing autoimmune disease research which includes autoimmune disease alone or post-infectious contexts.
  • Post-infectious contexts include chronic Lyme, Pediatric Acute-onset Neuropsychiatric Syndrome/Pediatric Autoimmune Neuropsychiatric Disorder Associated with Streptococcal infections, and Epstein-Barr Virus.

National Institute of Dental and Craniofacial Research (NIDCR)

  • Projects examining the interplay between oral and systemic health, spanning dental, oral, and craniofacial tissues in the context of chronic and infectious diseases.
  • Projects including AMP® datasets and oral health endpoints will be prioritized.

National Eye Institute (NEI) 

  • Focus on diseases studied in the Accelerating Medicines Partnership® (AMP®) and related NIH programs.
  • Focus on vision related autoimmune inflammatory, infectious, or immune-mediated diseases, including uveitides and other ocular inflammatory diseases.
  • Projects that integrate ophthalmic imaging, visual function measures, and eye-related clinical or real-world data with multi-omic and longitudinal datasets to support visual phenotyping, biomarker discovery, and predictive model development.
  • Projects that develop or validate AI/computational models of ocular inflammation, retinal structural progression, visual function decline, vision loss, disease activity, treatment response, or risk of ocular complications.

If the application is under consideration for funding, NIH will request "just-in-time" information from the applicant as described in the NIH Grants Policy Statement Section 2.5.1. Just-in-Time Procedures. This request is not a Notice of Award nor should it be construed to be an indicator of possible funding.

Prior to making an award, NIH reviews an applicant's federal award history in SAM.gov to ensure sound business practices. An applicant can review and comment on any information in the Responsibility/Qualification records available in SAM.gov.  NIH will consider any comments by the applicant in the Responsibility/Qualification records in SAM.gov to ascertain the applicant's integrity, business ethics, and performance record of managing Federal awards per 2 CFR Part 200.206 "Federal awarding agency review of risk posed by applicants."  This provision will apply to all NIH grants and cooperative agreements except fellowships.

3. Anticipated Announcement and Award Dates

After the peer review of the application is completed, the PD/PI will be able to access their Summary Statement (written critique) via the eRA Commons. Refer to Part 1 for dates for peer review, advisory council review, and earliest start date.

Information regarding the disposition of applications is available in the NIH Grants Policy Statement Section 2.4.4 Disposition of Applications.

Section VI. Award Administration Information

1. Award Notices

A Notice of Award (NoA) is the official authorizing document notifying the applicant that an award has been made and that funds may be requested from the designated HHS payment system or office. The NoA is signed by the Grants Management Officer and emailed to the recipient's business official.

In accepting the award, the recipient agrees that any activities under the award are subject to all provisions currently in effect or implemented during the period of the award, other Department regulations and policies in effect at the time of the award, and applicable statutory provisions.

Recipients must comply with any funding restrictions described in Section IV.6. Funding Restrictions. Any pre-award costs incurred before receipt of the NoA are at the applicant's own risk.  For more information on the Notice of Award, please refer to the NIH Grants Policy Statement Section 5. The Notice of Award and NIH Grants & Funding website, see Award Process.

Institutional Review Board or Independent Ethics Committee Approval: Recipient organizations must ensure that protocols are reviewed by their IRB or IEC. To help ensure the safety of participants enrolled in NIH-funded studies, the recipient must provide NIH copies of documents related to all major changes in the status of ongoing protocols.

Prior Approval of Collaborative Projects for SBI

Recipient-selected studies involving greater than minimal risk to human subjects, or use of data or samples that did not result from AMP studies require prior approval by NIH prior to initiation.

2. Administrative and National Policy Requirements

The following Federal wide and HHS-specific policy requirements apply to awards funded through NIH:

All federal statutes and regulations relevant to federal financial assistance, including those highlighted in NIH Grants Policy Statement Section 4 Public Policy Requirements, Objectives and Other Appropriation Mandates.

By applying for or accepting federal funds from HHS, recipients certify compliance with all federal antidiscrimination laws and these requirements and that complying with those laws is a material condition of receiving federal funding streams. Recipients are responsible for ensuring subrecipients, contractors, and partners also comply.

Applicants and recipients are strongly encouraged to refer to the NIH Director's Statement of Priorities, entitled "Advancing NIH's Mission Through a Unified Strategy." 

Recipients are responsible for ensuring that their activities comply with all applicable federal regulations. Pursuant to 2 CFR 200.340, by accepting an NIH award, the recipient agrees that continued funding for the award is contingent upon the availability of appropriated funds, recipient satisfactory performance, compliance with the Terms and Conditions of the award, and may also otherwise be terminated, to the extent authorized by law, if the agency determines that the award no longer effectuates the program goals or agency priorities, in line with 2 CFR 200.340(a)(4).

Pursuant to the Cybersecurity Act of 2015, Div. N, § 405, Pub. Law 114-113, 6 USC § 1533(d), the HHS Secretary has established a common set of voluntary, consensus-based, and industry-led guidelines, best practices, methodologies, procedures, and processes.

Successful recipients under this NOFO agree that:

When recipients, subrecipients, or third-party entities have:

  • ongoing and consistent access to HHS owned or operated information or operational technology systems; and
  • receive, maintain, transmit, store, access, exchange, process, or utilize personal identifiable information (PII) or personal health information (PHI) obtained from the awarding HHS agency for the purposes of executing the award.

Cybersecurity plans and procedures must at minimum include the following:

  • Develop cybersecurity plans and procedures, modeled after the NIST Cybersecurity framework, to protect HHS systems and data:
    • Identify:
      • Develop an inventory of all assets and accounts with access to HHS owned and operated information or operational technology systems or which obtain PII or PHI for the purposes of the award.
    • Protect:
      • Limit access to HHS owned and operated systems to only those in need of access to complete reward activities.
      • Require all staff to complete annual cybersecurity and privacy awareness training. Visit 405(d): Knowledge on Demand (hhs.gov) to obtain free trainings, if needed.
      • Enable multifactor authentication for all employees, subrecipients, and third-party entities to access HHS owned and operated information or operational technology systems.
      • Regularly backup sensitive data and test backups.
    • Detect:
      • Install anti-virus or anti-malware software on all devices, servers, and accounts used to connect to HHS owned and operated systems.
    • Respond:
      • Develop an incident response plan. See Incident-Response-Plan-Basics_508c.pdf (cisa.gov) to learn about developing incident response plans.
      • Have cybersecurity incident reporting procedures that ensure the relevant HHS awarding agencies are notified of a cybersecurity incident within 48 hours of discovery. A cybersecurity incident is defined as an unplanned interruption to a technology service or reduction in the quality of a technology service, or an occurrence that actually or potentially jeopardizes the confidentiality, integrity, or availability of an information system or the information the system processes, stores, or transmits.
    • Recover:
      • Investigate incidents and plug any security gaps identified. 

All activities proposed in your application and budget narrative must align with applicable law, including but not limited to statutes, executive orders, federal regulations and applicable judicial holdings.  Accordingly, discretionary awards shall not be used to fund, promote, encourage, subsidize, or facilitate; racial preferences or other forms of racial discrimination by the recipient, including activities where race or intentional proxies for race will be used as a selection criterion for employment or program participation; denial by the recipient of the sex binary in humans, or the belief that sex is a chosen or mutable characteristic; illegal immigration; or any other initiatives that compromise public safety.  If an application does not align, the application will not receive funding to the extent permitted by law and applicable court orders.

For applications involving substance abuse, the application must not support harm reduction. Please see Updated Funding Guidance for Recipients on Supplies and Services.

For applications involving funding Medication-Assisted Treatment (MAT) or medications for opioid use disorder (MOUD), this funding should be used to provide comprehensive treatment and recovery support services rather than medication-only models for opioid use disorder. Services should include medications, where clinically indicated, in conjunction with psychosocial and other treatment and recovery support services. Funding can also be used to support individualized tapering and discontinuation of medications when clinically indicated. Please see Updated Funding Guidance for Recipients on  MAT/MOUD.

Recipients of both Clinical Trial Required and Clinical Trial Optional awards subject to this term shall report standardized clinical trial activation and enrollment performance data for any interventional clinical trial supported under the award. These metrics are intended to assess trial startup efficiency, site activation, and post-activation performance and to support continuous quality improvement in clinical trial operations (see supplemental guidance). Recipients shall report required data annually at the time of Research Performance Progress Report (RPPR) submission on clinical trial activation and enrollment performance milestone dates as calendar dates; NIH will calculate standardized interval metrics from these dates.

Institutions are expected to maintain capabilities that support efficient clinical trial startup, participant enrollment, and performance monitoring, including streamlined workflows and systems for electronic tracking of milestones.  Recipients are encouraged to implement and evaluate approaches that improve trial efficiency and the participant experience.

As of October 1, 2025, HHS has adopted 2 CFR Part 200, with some modifications included in 2 CFR Part 300. These regulations replace those in 45 CFR Part 75. However, for NIH, under the Consolidated Appropriations Act for FY 2026, (P.L. 119-75, Division B, Title II, Sec. 224), the provisions relating to indirect costs in 45 CFR 75 continue to apply to NIH awards. Consistent with the statute, NIH will not apply updated thresholds outlined within 2 CFR Part 200, at this time.

In administering programs under this and all funding announcements, NIH prioritizes: 

  • Research involving rigorous scientific methods, including for studies related to children and adolescents, where NIH is committed to approaches that reflect the highest standards of clinical care and child safety. 
  • Biological and physiological integrity: Recognizing the relevance of biological sex to health outcomes, NIH encourages applicants to account for sex-based health factors in program design, data collection, and service delivery where scientifically appropriate.
  • NIH will implement these priorities consistent with applicable laws, regulations, court orders, and all required administrative procedures. Applicants are encouraged to describe how their proposed programs align with these priorities in their project narratives. Funded activities must advance NIH's vision of protecting and improving the health and well-being of Americans. The particular focus is on those who are medically vulnerable, or live in areas with limited access to care. NIH's duty is to serve wisely, effectively, and with measurable results that justify every taxpayer dollar invested. 
Cooperative Agreement Terms and Conditions of Award

The following special terms of award are in addition to, and not in lieu of, otherwise applicable U.S. Office of Management and Budget (OMB) administrative guidelines, U.S. Department of Health and Human Services (HHS) grant administration regulations at 2 CFR Part 200, 45 CFR 75 (for indirect costs), and other HHS, PHS, and NIH grant administration policies.

The administrative and funding instrument used for this program will be the cooperative agreement, an "assistance" mechanism (rather than an "acquisition" mechanism), in which substantial NIH programmatic involvement with the recipients is anticipated during the performance of the activities. Under the cooperative agreement, the NIH purpose is to support and stimulate the recipients' activities by involvement in and otherwise working jointly with the recipients in a partnership role; it is not to assume direction, prime responsibility, or a dominant role in the activities. Consistent with this concept, the dominant role and prime responsibility resides with the recipients for the project as a whole, although specific tasks and activities may be shared among the recipients and NIH as defined below.

The PD(s)/PI(s) will have the primary responsibility for:

  • Defining the research objectives, approaches, and details of the projects, and retaining primary responsibility for the planning, directing, and executing the proposed scientific activities.
  • Overseeing all aspects of studies including any modification of study design (which may require prior approval), conduct of the study, quality control, data analysis and interpretation, preparation of publications, dissemination of data, tools, and technologies, and collaboration with other investigators including industry.
  • Promoting the availability of the Program generated resources through outreach activities.
  • Establishing and maintaining a public-facing website.
  • Facilitating communication and collaboration among the Centers.
  • Disseminating data, results, and analyses to the broader scientific community, using NIH, NIAMS and/or NIAID repositories.
  • Ensuring that the approved Data Management and Sharing Plan is followed throughout the course of the award, including the appropriate use of standards and metadata.
  • Recipients will retain custody of and have primary rights to the data and software developed under these awards, subject to Government rights of access consistent with current HHS, PHS, and NIH policies.

NIH staff have substantial programmatic involvement that is above and beyond the normal stewardship role in awards, as described below:

  • Monitoring the progress of the Centers and Consortium and help coordinate research approaches across all Centers such as Consortium-wide work groups, codeathons, research responses in support of public health.
  • Keeping the Centers informed about other ongoing studies supported by NIH to avoid duplication of effort and encourage sharing/collaboration in infectious diseases research.
  • Serving as a resource to provide scientific/programmatic support during the accomplishment of the research by advising to the design of the activities, advising the selection of sources or resources (e.g., determining where a particular reagent or data can be found), providing research resources and reagents available from NIH recipients and contractors, or participating in the preparation of publications.
  • Coordinating access for the Centers to other NIH resources, as well as assisting the research efforts of the Centers by facilitating access to fiscal and intellectual resources provided by industry, private foundations, NIH intramural scientists and other federal government agencies as appropriate.
  • Participating in the development of study protocols, monitor compliance, enrollment targets, adherence to uniform data collection procedures, ongoing compliance with requirements and the timeliness and quality of data reporting.
  • NIH reserves the right to terminate or curtail the study in the event of (a) failure to implement the study protocol, (b) a substantial shortfall in participant recruitment, follow-up, data reporting and dissemination, quality control, or other major breach of the protocol, (c) substantive changes in the agreed-upon protocol with which NIH does not concur, (d) reaching a major study objective substantially before schedule with persuasive statistical evidence, or (e) human subject ethical issues that may dictate a premature termination.
  • Additionally, an agency program official or IC program director will be responsible for the normal scientific and programmatic stewardship of the award and will be named in the award notice.

Areas of Joint Responsibility include:

  • Establishing a Consortium-wide Scientific Advisory Group (SAG) that will meet on an annual basis in conjunction with the Annual Programmatic Meetings and on ad-hoc basis by conference calls, as needed. The NIH Project Scientist will serve as a non-voting member on the SAG.
  • Planning and organizing kick-off and annual programmatic meetings to establish the major roles and functions of the Consortium, to facilitate collaborations among the Centers, and update NIH on issues of need.
  • Ensuring that the data management and sharing approaches align with NIH guidance and AMP© processes, including use of appropriate standards and metadata. 
  • Ensuring that data are structured and documented to support interoperability, reuse, and integration across NIAID/NIH-relevant platforms.

Dispute Resolution:

Any disagreements that may arise in scientific or programmatic matters (within the scope of the award) between recipients and NIH may be brought to Dispute Resolution. A Dispute Resolution Panel composed of three members will be convened: a designee of the recipient chosen without NIH staff voting, one NIH designee, and a third designee with expertise in the relevant area who is chosen by the other two; in the case of individual disagreement, the first member may be chosen by the individual recipient. This special dispute resolution procedure does not alter the recipient's right to appeal an adverse action that is otherwise appealable in accordance with PHS regulation 42 CFR Part 50, Subpart D and HHS regulation 45 CFR Part 16.

3. Data Management and Sharing

A Data Management and Sharing Plan (DMS Plan) is required for any NIH-funded or conducted research that will generate scientific data. Applicants must submit the DMS Plan at the time of application using the NIH DMS Plan Format Page. The DMS Plan must address the elements in the structured format. Where the DMS Plan Format Page requires a "Yes or No" response, no additional narrative is allowed. The Data Management and Sharing (DMS) Plan must be provided in the Overall component.

Recipients must use NIH-approved repositories (https://www.nlm.nih.gov/NIHbmic/domain_specific_repositories.html) that may include but are not limited to ImmPort, Bioinformatics Resource Centers (BRCs), mapMECFS, Immune Epitope Database (IEDB), Accessing NIAID Clinical Trails Data etc. 

4. Reporting

Progress reports should briefly describe status of pilot projects, including data and safety monitoring, and should notify NIH of serious adverse events and unanticipated problems.

A final RPPR, invention statement, and the expenditure data portion of the Federal Financial Report are required for closeout of an award, as described in the NIH Grants Policy Statement Section 8.6 Closeout. NIH NOFOs outline intended research goals and objectives. Post award, NIH will review and measure performance based on the details and outcomes that are shared within the RPPR, as described at 2 CFR Part 200.301.

Section VII. Agency Contacts

We encourage inquiries concerning this funding opportunity and welcome the opportunity to answer questions from potential applicants. When contacting the email addresses below please add the NOFO number to the subject line to assist routing.

Application Submission Contacts

eRA Service Desk - Questions regarding ASSIST, eRA Commons, application errors and warnings, documenting system problems that threaten submission by the due date, and post-submission issues.

Grants.gov Support Center - Questions regarding Grants.gov registration and services (e.g., Workspace, subscriptions).

Scientific/Research Contact(s)

National Institute of Allergy and Infectious Diseases (NIAID)
Email: niaidogat@mail.nih.gov

National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIAMS)
Email: NIAMS_NOFOs@mail.nih.gov 

National Institute on Aging (NIA) 
Email: NIA-NOFO-Scientific@nih.gov
Include the Funding Opportunity Number in the subject line

Office of Autoimmune Disease Research (OADR-ORWH)
Email: OADRInfo@nih.gov

Office of Data Science Strategy (ODSS)
Email: ODSSInfo@mail.nih.gov  

National Institute of Dental and Craniofacial Research (NIDCR)
Email: NIDCR-Program@nih.gov

National Eye Institute (NEI)
Email: nei_extramural@nih.gov

National Heart, Lung, and Blood Institute (NHLBI)
Email: NHLBI_PMDS@nih.gov

National Human Genome Research Institute (NHGRI)
Email: nhgri-research-funding@mail.nih.gov

Peer Review Contact(s)

Examine your eRA Commons account for review assignment and contact information (information appears two weeks after the submission due date).

Financial/Grants Management Contact(s)

National Institute of Allergy and Infectious Diseases (NIAID) 
Email: NIAIDFinancial-GrantsContact@mail.nih.gov

National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIAMS)
Email: NIAMSGrants@nih.gov

National Institute on Aging (NIA) 
Email: NIA-NOFO-Grants@nih.gov
Include the Funding Opportunity Number in the subject line

National Institute of Dental and Craniofacial Research (NIDCR)
Email: deeranotifications@nidcr.nih.gov 

National Eye Institute (NEI)
Email: NEIGrantManagers@mail.nih.gov

National Heart, Lung, and Blood Institute (NHLBI)
NHLBIOGMInbox@nhlbi.nih.gov

National Human Genome Research Institute (NHGRI)
Grants Administration Branch
Email: nhgrigab@mail.nih.gov

Section VIII. Other Information

Recently issued trans-NIH policy notices may affect your application submission. A full list of policy notices published by NIH is provided in the NIH Guide for Grants and Contracts. All awards are subject to the terms and conditions, cost principles, and other considerations described in the NIH Grants Policy Statement.

Authority and Regulations

Awards are made under the authorization of Sections 301 and 405 of the Public Health Service Act as amended (42 USC 241 and 284) and under Federal Regulations 42 CFR Part 52 and 2 CFR Part 200.